In June, the weather in Villavicencio is typically warm. Average daily high temperature in June is about 21 degrees above zero. On average, Villavicencio has 21 rainy, 6 cloudy, 2 partly cloudy, and 1 sunny day in June. The rains are usually heavy. June as well as January, February, March, and April is considered the most uncomfortable time to visit Villavicencio.